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Apta-Index™: Anionic Porphyrins (ST1) (ID# 485)

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Anionic Porphyrins (ST1) (ID# 485)

Anionic Porphyrins (ST1)
* The secondary structure may not be accurate because of MFOLD limitations on chemistries other than RNA/DNA.
DNA N-methylmesoporphyrin IX (NMM), mesoporphyrin IX (MPIX), and other metalloderivatives Small Organic 0.7 µM (reported value) SB Buffer: 100 mM Tris-acetate (pH 7.4), 200 mM sodium acetate, 25 mM potassium acetate, 10 mM magnesium acetate, 0.5% Triton X-100, and 5% dimethyl sulfoxide. Heated to 90°C and then slowly cooled (over an hour) to room temperature. Thought to form a G-quartet
5'-dApdApdCpdGpdTpdGpdGpdGpdApdGpdGpdGpdCpdGpdGpdTpdGpdGpdTpdGpdTpdTpdGpdApdAp-3'
25 7883.18 g/mole 253400.00 L/(mole·cm) 60.00% 3.95 31.11

Note: Information on this aptamer oligo was obtained from the literature and hasn't been validated by Aptagen.

Y Li, CR Geyer, and D Sen. (1996) Recognition of anionic porphyrins by DNA aptamers. Biochem. 35:6911-6922.

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