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Apta-Index™: Pepocin (9-41U22) (ID# 171)

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Pepocin (9-41U22) (ID# 171)

Pepocin (9-41U22)
* The secondary structure may not be accurate because of MFOLD limitations on chemistries other than RNA/DNA.
RNA Pepocin Protein 18 nM (reported value) Binding buffer: 3 mM NaH2PO4, 3 mM MgCl2, 45 mM NaCl, 2.5 mM EDTA, 3 mM Tris-HCl (pH 7.5), 0.15 mM DTT, and 12% glycerol. N/A If the oligo is a known aptamer sequence: For binding studies, perform a refolding program to ensure proper function (i.e. binding to antigen or target). Refer to the aptamer reference source for the appropriate refolding parameters and binding conditions. Note: it is unknown whether aptamer functions properly without refolding.
5'-rGprGprGprAprGprUprCprUprGprAprAprGprUprCprGprGprAprCprUprUprGprUprUprAprUprCprAprAprUprUprCprAprCprUprUprCprAprGprAprCprUp-3'
41 13103.89 g/mole 410700.00 L/(mole·cm) 43.90% 2.43 31.91

Note: Information on this aptamer oligo was obtained from the literature and hasn't been validated by Aptagen.

Hirao et al. "RNA Aptamers That Bind to and Inhibit the Ribosome-inactivating Protein, Pepocin." The Journal of Biological Chemistry, 275(2000): 4943-4948.

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